IBISC  GENOPOLE     

Publications

Journals

  • N. Brunel, Parameter estimation of ODEs via nonparametric estimators, Electronic Journal of Statistics, Vol. 2 (2008) 1242–1267, pdf.
  • N. Brunel, J. Lapuyade-Lahorgue and W. Pieczynski,  Modeling and unsupervised classification of multivariate hidden Markov chains with copulas, (to appear in IEEE Transactions on Automatic Control, january 2010), pdf
  • M. Quach, N. Brunel and F. d'Alché-Buc, Estimating parameters and hidden variables in nonlinear state-space models based on ODEs for biological networks, Bioinformatics, 2007, 23, 3209--3216. accessible here, with supplementary material and code.
  • N. Brunel, W. Pieczynski, Unsupervised signal restoration using hidden Markov chains with copulas, Signal Processing, 85, pp. 2304-2315, 2005. pdf
 
Conferences
  • N. Brunel, W. Pieczynski and F. Barbaresco, Chaînes de Markov cachées multivariées à bruit corrélé non gaussien, avec applications à la segmentation du signal radar, Colloque GRETSI 2005, Louvain-la-Neuve, 3-6 sept. 2005. pdf
  • N. Brunel, W. Pieczynski, Modeling temporal dependence of Spherically Invariant Random Vectors with triplet Markov chains, IEEE Workshop on Statistical Signal Processing, July 17-20 2005, Bordeaux. pdf
  • N. Brunel, W. Pieczynski and S. Derrode, Copulas in Vectorial Hidden Markov Chains for Multicomponent Image Segmentation, Proceedings of ICASSP 2005, Philadelphia, 18-23 March 2005. pdf
  • N. Brunel, F. Barbaresco, Doppler and Polarimetric Statistical segmentation of Radar Clutter Environment based on Pairwise Markov Chains, Proceedings of Radar Toulouse 2004, Toulouse, 18-22 October 2004. pdf
  • N. Brunel, W. Pieczynski. Unsupervised signal restoration using copulas and pairwise Markov chains, Proceedings of the IEEE Workshop on Statistical Signal Processing (SSP 2003), Saint Louis (Missouri), September 28 - October 1, 2003. pdf

Work in progress

  • Bayesian estimation of ODEs with Monte Carlo methods, with Florence d'Alché-Buc.
  • Estimation of differential equations with orthogonality conditions, with Florence d'Alché-Buc.
  • Extracting modules in biological networks, with Yousri Slaoui and Florence d'Alché-Buc.
  • Hough transform for regression.

New Job Offer
 
a two-year
postdoc position
available in 2010
Network reverse-modeling
More details in Job Offers page


 

Machine Learning in Systems Biology,2009

This international workshop will take place at Ljubljana, Slovenia on September 5-6, 2009.
All details here


Top of page Recommend page Print version Contact  Accessible Version  Imprint